mbircone
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Background

  • Overview
    • Geometry
    • Arbitrary Length Units (ALU)
    • Matrix caching
  • Image Quality Tuning
    • User IQ Tuning
    • Automatic Parameter Selection
  • Theory
    • Forward Model
    • Prior Model
    • Proximal Map Prior
  • Credits
    • MBIR Cone Development Team
    • MBIRCONE Sponsors
    • Distribution Statement
    • Citation
  • References

User Guide

  • Installation
    • Downloading and installing from source
    • Installation on Windows and MacOS
  • API Reference
    • mbircone.cone3D
      • auto_image_size()
      • auto_sigma_p()
      • auto_sigma_w_denoise()
      • auto_sigma_x()
      • auto_sigma_x_denoise()
      • auto_sigma_y()
      • backproject()
      • calc_weights()
      • create_image_params_dict()
      • create_sino_params_dict()
      • denoise()
      • project()
      • recon()
    • mbircone.phantom
      • gen_microscopy_sample()
      • gen_microscopy_sample_3d()
      • gen_shepp_logan()
      • gen_shepp_logan_3d()
    • mbircone.preprocess
      • NSI_load_scans_and_params()
      • calc_background_offset()
      • calc_weights()
      • calc_weights_mar()
      • correct_tilt()
      • interpolate_defective_pixels()
      • transmission_CT_compute_sino()
    • mbircone.mace
      • mace3D()
      • mace4D()
    • mbircone.multinode
      • get_cluster_ticket()
      • scatter_gather()
    • mbircone.laminography
      • project_lamino()
      • recon_lamino()
    • mbircone.utils
      • hdf5_write()
  • Demos and Examples

Developer Guide

  • Clean installation
  • Running pytest
  • Preparing a new release
  • Upload package to PyPI
  • Build documentation with Sphinx
    • Build HTML locally
    • Build HTML in readthedocs
mbircone
  • Overview: module code

All modules for which code is available

  • mbircone.cone3D
  • mbircone.laminography
  • mbircone.mace
  • mbircone.multinode
  • mbircone.phantom
  • mbircone.preprocess
  • mbircone.utils

© Copyright 2021-2023, MBIRCONE Development Team. Revision 0309390f.

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